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 Welcome to PlantEMS !

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DNA modification-related databases

1) NGSmethDB 2017: enhanced methylomes and differential methylation.

2) MethBank 3.0: a database of DNA methylomes across a variety of species

3) DNAmod: the DNA modification database.

4) eRice: a refined epigenomic platform for japonica and indica rice.


RNA modification-related databases

1) m6AVar: a database of functional variants involved in m6A modification.

2) PRMdb: A repository of predicted RNA modifications in plants.

3) MODOMICS: a database of RNA modification pathways. 2017 update.

4) REDIdb 3.0: a comprehensive collection of RNA editing events in plant organellar genomes.

5) RNAmod: an integrated system for the annotation of mRNA modifications.

6) RMVar: an updated database of functional variants involved in RNA modifications.


PTM-related databases

1) PhosPhAt: the Arabidopsis thaliana phosphorylation site database. An update.

2) Plant PTM Viewer: the Plant PTM Viewer, a central resource for exploring plant protein modifications.

3) VPTMdb: a viral posttranslational modification database.

4) EPSD: a well-annotated database of protein phosphorylation sites in eukaryotes.

5) dbPSP 2.0: an updated database of protein phosphorylation sites in prokaryotes.

6) iCysMod: an integrative database for protein cysteine modifications in eukaryotes.

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